STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F2D4L0_HORVVPredicted protein; Belongs to the GST superfamily. (214 aa)    
Predicted Functional Partners:
A0A287PT97
Uncharacterized protein.
   
 0.962
A0A287DZQ0
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.953
A0A287XDQ0
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.953
F2D868_HORVV
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.953
A0A287HGF8
Thioredoxin domain-containing protein.
   
 0.912
A0A287HC24
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.885
A0A287HKY0
EF1_GNE domain-containing protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.885
A0A287TWP5
EF1_GNE domain-containing protein.
   
 0.885
A0A287TX87
EF1_GNE domain-containing protein.
   
 0.885
A0A287QQZ6
Glutathione synthetase.
    
 0.880
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.