STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F2D5S8_HORVVPredicted protein. (622 aa)    
Predicted Functional Partners:
A0A287MA17
Beta-Casp domain-containing protein.
    
 0.849
A0A287P8C0
Uncharacterized protein.
    
 0.778
A0A287NGC1
Uncharacterized protein.
    
 0.764
A0A287K695
Uncharacterized protein.
    
 0.763
A0A287T5U7
Uncharacterized protein.
    
 0.763
A0A287GPP0
Uncharacterized protein.
    
 0.711
A0A287RF50
Uncharacterized protein.
    
 0.711
A0A287RFF2
Uncharacterized protein.
    
 0.711
A0A287H8S3
Uncharacterized protein.
    
  0.690
A0A287G222
Uncharacterized protein.
    
  0.685
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 112509
Other names: H. vulgare subsp. vulgare, Hordeum sativum, Hordeum sativum Jess., Hordeum vulgare subsp. vulgare, Hordeum vulgare var. nudum, Hordeum vulgare var. nudum Spenn., Hordeum vulgare var. vulgare, domesticated barley, two-rowed barley
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.