Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A287I5P1 | A0A287NCD4 | A0A287I5P1 | A0A287NCD4 | PsbP domain-containing protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.997 |
| A0A287I5P1 | F2CRK1_HORVV | A0A287I5P1 | F2CRK1 | PsbP domain-containing protein. | Predicted protein. | 0.997 |
| A0A287I5P1 | M0Z7D1_HORVV | A0A287I5P1 | M0Z7D1 | PsbP domain-containing protein. | Uncharacterized protein. | 0.536 |
| A0A287I5P1 | psbF | A0A287I5P1 | S4Z1Y6 | PsbP domain-containing protein. | Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.980 |
| A0A287I5P1 | psbL | A0A287I5P1 | S4YYK3 | PsbP domain-containing protein. | Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. | 0.972 |
| A0A287I5P1 | psbT | A0A287I5P1 | S4Z1A2 | PsbP domain-containing protein. | Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. | 0.967 |
| A0A287NCD4 | A0A287I5P1 | A0A287NCD4 | A0A287I5P1 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | PsbP domain-containing protein. | 0.997 |
| A0A287NCD4 | F2CRK1_HORVV | A0A287NCD4 | F2CRK1 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Predicted protein. | 0.990 |
| A0A287NCD4 | M0Z7D1_HORVV | A0A287NCD4 | M0Z7D1 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.549 |
| A0A287NCD4 | psbF | A0A287NCD4 | S4Z1Y6 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.976 |
| A0A287NCD4 | psbL | A0A287NCD4 | S4YYK3 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. | 0.974 |
| A0A287NCD4 | psbT | A0A287NCD4 | S4Z1A2 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. | 0.969 |
| A0A287PXJ6 | M0XCF8_HORVV | A0A287PXJ6 | M0XCF8 | Uncharacterized protein. | Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family. | 0.996 |
| A0A287PXJ6 | M0Z7D1_HORVV | A0A287PXJ6 | M0Z7D1 | Uncharacterized protein. | Uncharacterized protein. | 0.499 |
| A0A287VNH5 | M0Z7D1_HORVV | A0A287VNH5 | M0Z7D1 | Uncharacterized protein. | Uncharacterized protein. | 0.623 |
| F2CRK1_HORVV | A0A287I5P1 | F2CRK1 | A0A287I5P1 | Predicted protein. | PsbP domain-containing protein. | 0.997 |
| F2CRK1_HORVV | A0A287NCD4 | F2CRK1 | A0A287NCD4 | Predicted protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.990 |
| F2CRK1_HORVV | M0Z7D1_HORVV | F2CRK1 | M0Z7D1 | Predicted protein. | Uncharacterized protein. | 0.559 |
| F2CRK1_HORVV | psbF | F2CRK1 | S4Z1Y6 | Predicted protein. | Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.997 |
| F2CRK1_HORVV | psbL | F2CRK1 | S4YYK3 | Predicted protein. | Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. | 0.997 |
page 1 of 3