STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERL08626.1Virulence activator alpha C-terminal family protein. (187 aa)    
Predicted Functional Partners:
ERL08746.1
SCP-2 sterol transfer family protein.
 
   
 0.899
ERL08724.1
Transcriptional regulator, TetR family.
 
  
 0.662
ERL08631.1
Transporter, major facilitator family protein.
 
   
 0.598
ERL08776.1
Hypothetical protein; Identified by glimmer; putative.
       0.553
ERL07503.1
DEAD/DEAH box helicase.
    
   0.403
Your Current Organism:
Olsenella profusa
NCBI taxonomy Id: 1125712
Other names: O. profusa F0195, Olsenella profusa F0195, Olsenella profusa str. F0195, Olsenella profusa strain F0195
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.