STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERF60743.1Oligopeptide ABC transporter, oligopeptide-binding protein. (354 aa)    
Predicted Functional Partners:
ERF60760.1
ABC transporter, permease protein.
 
 0.999
ERF60742.1
ABC transporter, permease protein.
 
 
 0.998
ERF60725.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.993
ERF61257.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.781
ERF60727.1
OmpA family protein.
  
    0.776
ERF60748.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
ERF61776.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.769
ERF59425.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.761
ERF60479.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.750
ERF60306.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.728
Your Current Organism:
Treponema socranskii VPIDR56BR1116
NCBI taxonomy Id: 1125725
Other names: T. socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536, Treponema socranskii subsp. socranskii ATCC 35536, Treponema socranskii subsp. socranskii ATCC 35536 = VPI DR56BR1116, Treponema socranskii subsp. socranskii VPI DR56BR1116, Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536
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