STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
whiB-2Hypothetical protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (108 aa)    
Predicted Functional Partners:
EPD70094.1
Hypothetical protein.
  
   
 0.828
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
   
 0.822
EPD69927.1
Hypothetical protein.
  
     0.768
EPD70208.1
Protein-export membrane protein secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.766
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.745
EPD67883.1
Hypothetical protein.
  
     0.742
EPD70302.1
Hypothetical protein.
  
     0.672
nucS
UPF0286 protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.655
clpS
ATP-dependent Clp protease adapter protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
     0.620
EPD67629.1
Hypothetical protein.
  
     0.615
Your Current Organism:
Corynebacterium pyruviciproducens
NCBI taxonomy Id: 1125779
Other names: C. pyruviciproducens ATCC BAA-1742, Corynebacterium pyruviciproducens 06-1773O, Corynebacterium pyruviciproducens ATCC BAA-1742, Corynebacterium pyruviciproducens WAL06, Corynebacterium sp. 06-1773O
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