STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NT26_2719Putative response regulator in two-component regulatory system, sigma 54-dependent; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (525 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.780
NT26_3657
Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
0.706
NT26_3421
Putative two-component response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.632
ntrB
Nitrogen regulation protein; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.589
NT26_2202
Sensor protein.
 
 
 0.566
NT26_2720
Putative oligoendopeptidase F; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.537
fixL
FixL-like Two-components system sensor/response regulator hybrid histidine kinase; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
 
 0.529
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.529
NT26_0211
Putative flagellar motor switch protein FliM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structure.
  
  
 0.522
fliG
Flagellar motor switch protein FliG; Function of homologous gene experimentally demonstrated in an other organism; structure.
  
  
 0.520
Your Current Organism:
Rhizobium sp. NT26
NCBI taxonomy Id: 1125847
Other names: R. sp. NT-26, Rhizobium sp. NT-26, arsenite-oxidising bacterium NT-26
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