STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI37973.1Hypothetical protein. (840 aa)    
Predicted Functional Partners:
SFH80915.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.584
SFI09423.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.477
SFI23937.1
SusD family protein.
  
 
   0.459
SFH95365.1
Starch-binding associating with outer membrane.
  
 
   0.442
SFH95734.1
Alpha-2-macroglobulin family protein.
  
     0.432
SFI21750.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.432
SFI25872.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.426
SFI55502.1
YHS domain-containing protein.
  
     0.426
SFI29219.1
Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family.
  
     0.425
SFI42065.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.411
Your Current Organism:
Chryseobacterium frigidisoli
NCBI taxonomy Id: 1125876
Other names: C. frigidisoli, Chryseobacterium frigidisoli Bajerski et al. 2013, Chryseobacterium sp. PB4, DSM 26000, LMG 27025, LMG:27025, strain PB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.