STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAJ32345.1Ubiquinol oxidase chainD, P18403, evalue=8e-22. (126 aa)    
Predicted Functional Partners:
GAJ32346.1
Cytochrome o ubiquinol oxidase subunit III; P18402, evalue=4e-61.
 
 0.999
GAJ32347.1
Ubiquinol oxidase polypeptide I; P18401, evalue=0.0; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
GAJ32348.1
Ubiquinol oxidase polypeptide II precursor; Q9WWR1, evalue=3e-76.
 
 0.999
GAJ33732.1
Ubiquinol oxidase polypeptide II precursor; P50653, evalue=3e-54.
 
 0.998
GAJ33733.1
Probable cytochrome c oxidase polypeptide I; P98057, evalue=0.0; Belongs to the heme-copper respiratory oxidase family.
 
 0.998
GAJ33734.1
Cytochrome o ubiquinol oxidase subunit III; P18402, evalue=3e-45.
 
 0.997
GAJ32462.1
Cytochrome c oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.993
GAJ32461.1
Probable cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.991
GAJ32466.1
Cytochrome c oxidase polypeptide III; P06030, evalue=5e-79.
  
 0.991
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
 
 0.937
Your Current Organism:
Bradyrhizobium sp. DOA9
NCBI taxonomy Id: 1126627
Other names: B. sp. DOA9
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