STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAJ35106.1Membrane-bound lytic murein transglycosylase B precursor; P41052, evalue=4e-22. (411 aa)    
Predicted Functional Partners:
tal
Transaldolase 2; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
    
 0.920
GAJ33536.1
Penicillin-binding protein 2; PBP-2, P08149, evalue=2e-64.
   
 0.807
GAJ33533.1
Probable N-acetylmuramoyl-L-alanine amidase ybjR; P75820, evalue=1e-29.
    
 0.751
GAJ35039.1
N-acetylmuramoyl-L-alanine amidase amiC precursor; Q46929, evalue=6e-36.
 
  
 0.691
GAJ32879.1
Beta-hexosaminidase; Q82SJ8, evalue=5e-30.
    
 0.690
GAJ35501.1
Beta-hexosaminidase; Q7NWB7, evalue=4e-41.
    
 0.690
GAJ32270.1
Hypothetical protein.
    
 0.650
GAJ35296.1
Penicillin-binding protein 6 precursor; D-alanyl-D-alaninecarboxypeptidase fraction C, P08506, evalue=4e-60; Belongs to the peptidase S11 family.
 
 
 0.641
GAJ35851.1
Penicillin-binding protein dacF precursor; D-alanyl-D-alaninecarboxypeptidase, P38422, evalue=1e-28; Belongs to the peptidase S11 family.
 
 
 0.632
GAJ31280.1
Penicillin-binding protein 6 precursor; D-alanyl-D-alaninecarboxypeptidase fraction C, P08506, evalue=3e-37; Belongs to the peptidase S11 family.
 
 
 0.620
Your Current Organism:
Bradyrhizobium sp. DOA9
NCBI taxonomy Id: 1126627
Other names: B. sp. DOA9
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.