STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAJ37038.1Hypothetical UPF0194 membrane protein YP0975/Ecs0873; Q93AA7, evalue=4e-08; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (297 aa)    
Predicted Functional Partners:
macB
Macrolide-specific ABC-type efflux carrier; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 0.944
GAJ37036.1
Hypothetical protein.
 
  
  0.790
GAJ33684.1
Transport/processing ATP-binding protein comA; P59653, evalue=1e-82.
  
 0.778
GAJ33685.1
Cyclolysin secretion/processing ATP-binding protein cyaB; P18770, evalue=7e-55.
  
 0.778
GAJ37375.1
Cyclolysin secretion/processing ATP-binding protein cyaB; P18770, evalue=1e-77.
  
 0.778
GAJ35969.1
Macrolide-specific ABC-type efflux carrier; P75831, evalue=5e-34.
 
 
 0.739
GAJ37035.1
Hypothetical protein.
 
  
  0.704
GAJ34054.1
Outer membrane protein tolC precursor; Q9K2Y1, evalue=8e-16.
  
 0.688
GAJ35284.1
Alkaline protease secretion protein aprF; Q03027, evalue=6e-18.
  
 0.688
GAJ36217.1
Outer membrane protein oprM precursor; Q51487, evalue=1e-37.
 
 0.688
Your Current Organism:
Bradyrhizobium sp. DOA9
NCBI taxonomy Id: 1126627
Other names: B. sp. DOA9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.