STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAJ37836.1feMo cofactor biosynthesis protein nifB; P06770, evalue=1e-38. (166 aa)    
Predicted Functional Partners:
GAJ36908.1
Nitrogenase iron-molybdenum cofactor biosynthesis protein nifE; P26506, evalue=0.0; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.985
GAJ36907.1
Nitrogenase iron-molybdenum cofactor biosynthesis protein nifN; P26507, evalue=0.0; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.982
GAJ36909.1
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.974
GAJ37807.1
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.974
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.973
nifH-2
Nitrogenase iron protein 2; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.973
GAJ36910.1
Nitrogenase molybdenum-iron protein alpha chain; P06120, evalue=0.0.
 
 
 0.972
GAJ37806.1
Nitrogenase molybdenum-iron protein alpha chain; P06120, evalue=0.0.
 
 
 0.972
GAJ36906.1
nifX protein; O87628, evalue=6e-51.
 
  
 0.970
GAJ37810.1
Putative ferredoxin III; fdIII, P55678, evalue=2e-17.
 
    0.959
Your Current Organism:
Bradyrhizobium sp. DOA9
NCBI taxonomy Id: 1126627
Other names: B. sp. DOA9
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