STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCF64710.1Acyl-CoA synthetase; Function of strongly homologous gene; enzyme. (551 aa)    
Predicted Functional Partners:
CCF64709.1
Homologs of previously reported genes of unknown function.
       0.781
CCF62488.1
Putative non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.707
CCF65690.1
O-succinylbenzoic acid---CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.701
CCF65186.1
Putative acyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.693
limB
Limonene 1,2-monooxygenase; Function of strongly homologous gene; enzyme.
     
 0.688
pks13
POLYKETIDE SYNTHASE PKS13; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.680
CCF64708.1
Conserved protein of unknown function, putative alcohol dehydrogenase zinc-binding domain; Homologs of previously reported genes of unknown function.
       0.678
echA-4
enoyl-CoA hydratase; Function of strongly homologous gene; enzyme.
  
 
 0.667
CCF61614.1
Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.667
CCF65553.1
Non-ribosomal peptide synthetase; Function of strongly homologous gene; enzyme.
  
 
0.637
Your Current Organism:
Nocardia cyriacigeorgica
NCBI taxonomy Id: 1127134
Other names: N. cyriacigeorgica GUH-2, Nocardia cyriacigeorgica GUH-2, Nocardia cyriacigeorgica str. GUH-2, Nocardia cyriacigeorgica strain GUH-2
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