STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_0017Hypothetical protein. (262 aa)    
Predicted Functional Partners:
GLIP_0978
Hypothetical protein.
  
     0.687
GLIP_4019
Hypothetical protein.
  
 
   0.536
GLIP_2642
Hypothetical protein.
  
     0.528
GLIP_1412
TetR family transcriptional regulator.
  
     0.477
GLIP_0960
Hypothetical protein.
  
     0.474
GLIP_1669
Hypothetical protein.
  
     0.471
GLIP_1668
Hypothetical protein.
  
     0.465
GLIP_2812
TPR domain protein.
  
     0.464
GLIP_1767
Hypothetical protein.
  
     0.461
GLIP_1552
Hypothetical protein.
  
     0.459
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.