STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_0128Hypothetical protein. (328 aa)    
Predicted Functional Partners:
GLIP_0127
Hypothetical protein.
    0.989
GLIP_0129
Hypothetical protein.
 
    0.911
GLIP_0130
Hypothetical protein.
 
    0.911
GLIP_0132
Hypothetical protein.
 
  
 0.890
GLIP_0126
Hypothetical protein.
       0.737
GLIP_0131
Hypothetical protein.
 
    0.685
GLIP_3889
Hypothetical protein.
 
    0.578
GLIP_2193
Nucleoside recognition domain-containing protein.
   
  
 0.565
rtcB
tRNA-splicing ligase RtcB.
  
     0.533
GLIP_0125
Hypothetical protein.
       0.493
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.