STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_0182Thioredoxin peroxidase. (175 aa)    
Predicted Functional Partners:
GLIP_0180
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.552
GLIP_1235
Hypothetical protein.
  
     0.508
GLIP_0845
Hypothetical protein.
 
   
 0.446
GLIP_0401
Hypothetical protein.
  
     0.441
GLIP_3250
2-haloacid dehalogenase.
 
     0.420
gabD1
Succinate-semialdehyde dehydrogenase [NADP+].
    
  0.418
mdtE
Multidrug resistance protein mdtE; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.409
mepB
Multidrug/solvent efflux pump membrane transporter mepB.
       0.409
arpC
Antibiotic efflux pump outer membrane protein ArpC.
       0.409
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.408
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.