STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_0202Hypothetical protein. (245 aa)    
Predicted Functional Partners:
GLIP_1887
Transcriptional regulator, LuxR family.
  
 
 0.880
GLIP_0203
Hypothetical protein.
 
     0.869
GLIP_2846
Hypothetical protein.
 
     0.775
GLIP_0676
Chain length determinant family protein.
  
     0.770
GLIP_3073
Sensor histidine kinase.
  
     0.767
GLIP_0205
Hypothetical protein.
  
     0.764
GLIP_2845
Hypothetical protein.
 
     0.757
GLIP_0199
Peptidase S1/S6, chymotrypsin/Hap.
 
     0.747
GLIP_4298
TPR repeat-containing protein.
  
     0.741
wza-2
Polysaccharide export outer membrane protein.
  
     0.728
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.