STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fcuAFerrichrome receptor fcuA. (734 aa)    
Predicted Functional Partners:
GLIP_0342
Hypothetical protein.
 
    0.918
fecR
Transmembrane sensor.
 
  
 0.649
GLIP_0341
Hypothetical protein.
       0.628
GLIP_1172
Iron complex outermembrane recepter protein.
  
    0.626
GLIP_1058
Hypothetical protein.
   
  
 0.611
GLIP_0339
Hypothetical protein.
 
    0.573
GLIP_1294
Hypothetical protein.
 
    0.554
GLIP_0179
Hypothetical protein.
  
  
 0.535
GLIP_2913
Hypothetical protein.
  
  
 0.535
GLIP_3772
Hypothetical protein.
  
  
 0.535
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.