STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_0402Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
GLIP_0401
Hypothetical protein.
 
     0.880
hdfR
HTH-type transcriptional regulator hdfR; Belongs to the LysR transcriptional regulatory family.
  
     0.700
oxyR
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.689
GLIP_1629
LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
  
     0.655
GLIP_1393
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.630
GLIP_4277
Regulatory protein LysR:LysR substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.614
GLIP_0842
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.611
GLIP_3100
Transcriptional regulator, LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.581
GLIP_0644
Regulatory protein LysR:LysR substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.467
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.460
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.