STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsCArsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (156 aa)    
Predicted Functional Partners:
GLIP_0431
Arsenite transporter, ACR3 family.
  
 0.985
arsC-2
Arsenate reductase.
 
  
 0.968
arsH
Arsenical resistance protein ArsH.
  
  
 0.841
arsR
ArsR family transcriptional regulator.
  
  
 0.837
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.721
trxB
Thioredoxin reductase; NADPH.
    
 0.719
GLIP_3565
Thioredoxin domain-containing protein.
  
 
 0.714
trxA
Thioredoxin 1; Belongs to the thioredoxin family.
  
 
 0.714
GLIP_3183
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
 
 
 0.713
GLIP_0674
Bacterial sugar transferase domain protein.
  
 
 0.651
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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