STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdSType I restriction enzyme, S subunit. (431 aa)    
Predicted Functional Partners:
hsdM
Type I restriction enzyme M protein.
 
 0.997
hsdM-3
Type I restriction enzyme M protein.
 
 0.985
hsdM-2
Type I restriction enzyme M protein.
 
 0.984
hsdR
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.943
GLIP_2331
Conserved hypothetical protein.
  
 
 0.867
hsdR-2
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.863
GLIP_0565
Hypothetical protein.
 
     0.847
GLIP_0574
Hypothetical protein.
       0.773
GLIP_3642
Hypothetical protein.
 
    0.712
GLIP_0573
Hypothetical protein.
       0.668
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.