STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kpsMPolysialic acid transport protein kpsM. (262 aa)    
Predicted Functional Partners:
ctrD
Capsule polysaccharide export ATP-binding protein ctrD.
 
 0.999
GLIP_0662
Capsular polysaccharide transport system permease protein.
 
 
 0.998
kpsD
Polysialic acid transport protein kpsD.
 
  
 0.975
rfbF
Rhamnosyltransferase.
 
  
 0.803
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
   
 0.797
GLIP_0658
Hypothetical protein.
       0.723
GLIP_0707
Glycosyl transferase family protein.
 
  
 0.674
GLIP_0722
Hypothetical protein.
 
  
 0.654
wza
Polysaccharide export outer membrane protein.
  
  
 0.651
wza-2
Polysaccharide export outer membrane protein.
  
  
 0.651
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.