STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_0673Polysaccharide deacetylase domain protein. (285 aa)    
Predicted Functional Partners:
GLIP_0672
FemAB-related protein, PEP-CTERM system-associated.
 
   
 0.951
GLIP_0670
Hypothetical protein.
 
     0.950
GLIP_0671
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
     0.949
GLIP_0669
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
     0.937
pimB
Phosphatidylinositol alpha-1,6-mannosyltransferase.
 
     0.935
GLIP_0674
Bacterial sugar transferase domain protein.
 
   
 0.918
wza-2
Polysaccharide export outer membrane protein.
 
     0.889
GLIP_0666
Phosphatidylinositol glycan, class A.
 
     0.877
asnB
Asparagine synthase; Glutamine-hydrolysing.
 
     0.875
GLIP_0676
Chain length determinant family protein.
 
     0.874
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.