STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_1058Hypothetical protein. (2422 aa)    
Predicted Functional Partners:
ppsE
Phenolpthiocerol synthesis type-I polyketide synthase E.
 
0.999
GLIP_1053
Hypothetical protein.
 
 0.997
fabD
[acyl-carrier-protein] S-malonyltransferase.
 
 0.997
GLIP_2578
Hypothetical protein.
0.996
GLIP_0209
acyl-CoA ligase (AMP-forming), exosortase system type 1 associated.
 
0.995
alkK
medium-chain-fatty-acid--CoA ligase.
 
0.995
fadD
Long-chain acyl-CoA synthetase.
  
0.995
GLIP_1329
Solute carrier family 27 (fatty acid transporter), member 1/4.
 
 0.995
caiC
crotonobetaine/carnitine-CoA ligase.
0.995
GLIP_1363
fatty-acyl-CoA synthase.
 
0.995
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.