STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_1077Hypothetical protein. (434 aa)    
Predicted Functional Partners:
GLIP_1732
Outer membrane protein; Belongs to the skp family.
  
 
 
 0.773
GLIP_4185
Hypothetical protein.
  
     0.730
GLIP_1089
Phage integrase family protein; Belongs to the 'phage' integrase family.
  
     0.685
GLIP_1304
Hypothetical protein.
  
     0.646
GLIP_0125
Hypothetical protein.
  
     0.624
GLIP_1177
Hypothetical protein.
  
     0.612
GLIP_0872
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.609
GLIP_0744
Hypothetical protein.
  
     0.596
GLIP_0791
Hypothetical protein.
  
     0.592
GLIP_1316
phospholipase/Carboxylesterase.
  
     0.586
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.