STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sacC-2Levanase; Belongs to the glycosyl hydrolase 32 family. (667 aa)    
Predicted Functional Partners:
GLIP_1087
Tetratricopeptide repeat-containing SusD/RagB family protein.
 
  
  0.837
GLIP_1086
Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
     0.805
GLIP_1088
Hypothetical protein.
 
     0.732
scrK
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
 
 0.706
scrK-2
Fructokinase.
 
 0.559
sacA
Beta-fructofuranosidase.
 
    
0.558
crr
PTS system, glucose-specific IIA component.
 
 
 0.558
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.543
GLIP_1083
Hypothetical protein.
       0.522
GLIP_3991
Sugar phosphate isomerase/epimerase.
  
     0.495
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.