STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_1279Simple sugar transport system substrate-binding protein. (316 aa)    
Predicted Functional Partners:
GLIP_1282
Simple sugar transport system ATP-binding protein.
 
 0.999
GLIP_0462
Hypothetical protein.
   
 0.997
GLIP_0603
GAF sensor hybrid histidine kinase.
   
 0.997
arcB
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
   
 0.997
GLIP_3913
Hypothetical protein.
   
 0.997
GLIP_1254
Multi-sensor hybrid histidine kinase.
   
 0.993
GLIP_1813
Histidine kinase.
   
 0.993
barA
Two-component system, NarL family, sensor histidine kinase BarA.
   
 0.993
GLIP_0287
Multidomain protein; Contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain.
   
 0.992
GLIP_3629
Hypothetical protein.
   
 0.992
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.