STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_1341Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (293 aa)    
Predicted Functional Partners:
fabG-3
3-oxoacyl-[acyl-carrier protein] reductase.
    
0.963
cpnA
Cyclopentanol dehydrogenase.
 
    
0.927
GLIP_1338
acyl-CoA dehydrogenase-like protein.
 
 
  0.924
linX
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase.
 
  
 
0.913
GLIP_1336
Probable enoyl-ACP reductase.
 
 
  0.910
GLIP_1334
Coenzyme A transferase, putative.
 
  
  0.909
GLIP_1339
acyl-CoA dehydrogenase domain protein.
 
 
  0.908
GLIP_1333
CoA-transferase, alpha subunit.
 
  
  0.900
bphC1
Biphenyl-2,3-diol 1,2-dioxygenase 1.
 
 
  0.891
ppsE
Phenolpthiocerol synthesis type-I polyketide synthase E.
  
 0.881
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.