STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_1521Hypothetical protein. (335 aa)    
Predicted Functional Partners:
GLIP_1520
Hypothetical protein.
       0.693
GLIP_1716
Hypothetical protein.
  
     0.675
GLIP_2698
Hypothetical protein.
  
     0.636
pilW
Type IV pilus assembly protein PilW.
  
     0.628
GLIP_1588
Membrane-associated hydrolase of alkaline phosphatase superfamily protein.
  
     0.621
GLIP_4354
Hypothetical protein.
  
     0.603
gspB
General secretion pathway protein B.
  
     0.599
GLIP_3314
Kef-type K+ transport system, predicted NAD-binding component.
  
     0.586
syd
Protein syd; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family.
  
     0.573
GLIP_4044
Hypothetical protein.
  
     0.566
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.