STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_1702Hypothetical protein. (185 aa)    
Predicted Functional Partners:
GLIP_0281
Hypothetical protein.
 
    0.733
GLIP_1211
Hypothetical protein.
   
 
 0.676
GLIP_1571
Osmoprotectant transport system substrate-binding protein.
  
    0.630
GLIP_2659
Hypothetical protein.
   
  
 0.610
GLIP_1233
Hypothetical protein.
  
     0.557
GLIP_1686
TonB-dependent receptor domain protein.
  
     0.553
GLIP_0110
Hypothetical protein.
  
     0.521
kefC
Glutathione-regulated potassium-efflux system protein kefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.482
GLIP_3215
CRISPR-associated Csy1 family protein.
  
     0.482
GLIP_1524
Hypothetical protein.
  
     0.472
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.