STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_1710Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)    
Predicted Functional Partners:
GLIP_1711
Phosphoglycerate mutase.
 
     0.905
ppsE
Phenolpthiocerol synthesis type-I polyketide synthase E.
   
 0.891
GLIP_1058
Hypothetical protein.
  
 
 0.857
gltB
Glutamate synthase (NADPH/NADH) large chain.
    
  0.857
GLIP_2494
Hypothetical protein.
  
  
  0.745
GLIP_0483
Hypothetical protein.
     
 0.663
nadA
Quinolinate synthase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.
   
    0.608
GLIP_1415
Hypothetical protein.
  
     0.585
GLIP_1712
acyl-CoA dehydrogenase family member 11.
 
  
  0.563
GLIP_1709
Hypothetical protein.
       0.541
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.