rluA protein (Aliiglaciecola lipolytica) - STRING interaction network

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Predicted Interactions

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Score

rluA

tRNA pseudouridine32 synthase. (223 aa)

Predicted Functional Partners:

GLIP_1621

0.881

rplC

0.854

rplM

0.849

rplX

0.848

ybeB

0.839

rplQ

0.834

rplU

0.834

rplK

0.827

rplO

0.827

rplN

0.826

Your Current Organism:

Aliiglaciecola lipolytica

NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLIP_1621	rluA	GLIP_1621	GLIP_1806	Hypothetical protein; Belongs to the UPF0176 family.	tRNA pseudouridine32 synthase.	0.881
rluA	GLIP_1621	GLIP_1806	GLIP_1621	tRNA pseudouridine32 synthase.	Hypothetical protein; Belongs to the UPF0176 family.	0.881
rluA	rplC	GLIP_1806	GLIP_3359	tRNA pseudouridine32 synthase.	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.854
rluA	rplK	GLIP_1806	GLIP_3536	tRNA pseudouridine32 synthase.	Large subunit ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.827
rluA	rplM	GLIP_1806	GLIP_2987	tRNA pseudouridine32 synthase.	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.849
rluA	rplN	GLIP_1806	GLIP_3790	tRNA pseudouridine32 synthase.	Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.826
rluA	rplO	GLIP_1806	GLIP_3781	tRNA pseudouridine32 synthase.	Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.827
rluA	rplQ	GLIP_1806	GLIP_3775	tRNA pseudouridine32 synthase.	Large subunit ribosomal protein L17.	0.834
rluA	rplU	GLIP_1806	GLIP_4157	tRNA pseudouridine32 synthase.	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.834
rluA	rplX	GLIP_1806	GLIP_3789	tRNA pseudouridine32 synthase.	Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.848
rluA	ybeB	GLIP_1806	GLIP_2294	tRNA pseudouridine32 synthase.	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.839
rplC	rluA	GLIP_3359	GLIP_1806	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	tRNA pseudouridine32 synthase.	0.854
rplC	rplK	GLIP_3359	GLIP_3536	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.999
rplC	rplM	GLIP_3359	GLIP_2987	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplN	GLIP_3359	GLIP_3790	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rplC	rplO	GLIP_3359	GLIP_3781	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplC	rplQ	GLIP_3359	GLIP_3775	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L17.	0.997
rplC	rplU	GLIP_3359	GLIP_4157	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.995
rplC	rplX	GLIP_3359	GLIP_3789	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.999
rplC	ybeB	GLIP_3359	GLIP_2294	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.947