STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_1988Protein containing HTH domain. (246 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.711
pel
Pectate lyase.
  
     0.683
GLIP_0989
Hypothetical protein.
  
     0.632
GLIP_0990
Small GTP-binding protein.
 
     0.594
GLIP_1987
Hypothetical protein.
       0.554
GLIP_1847
Hypothetical protein.
  
     0.500
GLIP_1845
Hypothetical protein.
  
     0.493
GLIP_3531
BR serine/threonine kinase.
  
     0.489
GLIP_1248
S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase.
  
  
  0.483
GLIP_1625
Hypothetical protein.
  
   
 0.478
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.