STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_2115Two-component system, OmpR family, sensor kinase. (454 aa)    
Predicted Functional Partners:
GLIP_0687
Hypothetical protein.
 
0.985
GLIP_3913
Hypothetical protein.
 
 
0.978
GLIP_0591
Hypothetical protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
0.974
ompR
Transcriptional regulatory protein ompR.
  0.960
GLIP_0462
Hypothetical protein.
 
 
0.947
GLIP_0603
GAF sensor hybrid histidine kinase.
 
 
0.946
arcB
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
 
 
0.939
GLIP_1808
Hypothetical protein.
 
 
  0.910
ompR-2
Transcriptional regulatory protein ompR.
 
  0.890
cpxR
Transcriptional regulatory protein CpxR.
 
  0.885
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.