STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_2308Hypothetical protein. (93 aa)    
Predicted Functional Partners:
msrB
Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
  
    0.898
GLIP_2309
Hypothetical protein.
     
 0.807
GLIP_2307
Hypothetical protein.
       0.791
GLIP_3710
Hypothetical protein.
  
     0.706
sdhD
Succinate dehydrogenase membrane anchor subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
    0.614
miaE
tRNA-(ms[2]io[6]A)-hydroxylase.
  
     0.612
GLIP_1947
Hypothetical protein.
  
     0.601
GLIP_2310
Alanine or glycine:cation symporter, AGCS family.
       0.572
dedD
DedD protein.
  
     0.564
GLIP_4135
Hypothetical protein.
  
     0.561
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.