STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagFCDP-glycerol glycerophosphotransferase. (378 aa)    
Predicted Functional Partners:
tarD
Glycerol-3-phosphate cytidylyltransferase.
 
  
 0.956
flgK
Flagellar hook-associated protein 1 FlgK.
  
    0.631
GLIP_2589
Hypothetical protein.
  
  
 0.566
asnB-3
Asparagine synthase; Glutamine-hydrolysing.
       0.487
GLIP_2585
Low specificity phosphatase (HAD superfamily)-like.
       0.485
GLIP_2588
Hypothetical protein.
       0.479
ctrD
Capsule polysaccharide export ATP-binding protein ctrD.
  
 
 0.478
GLIP_2587
Cupin 2 domain-containing protein.
       0.474
GLIP_2590
Hypothetical protein.
       0.467
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.466
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.