STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_2624Hypothetical protein. (623 aa)    
Predicted Functional Partners:
GLIP_2627
Hypothetical protein.
 
     0.955
GLIP_2626
Hypothetical protein.
 
     0.950
GLIP_2628
Hypothetical protein.
 
  
 0.935
GLIP_2623
Hypothetical protein.
 
    0.916
GLIP_2625
Hypothetical protein.
    
0.890
amiC
N-acetylmuramoyl-L-alanine amidase AmiC.
    
  0.695
GLIP_0260
Hypothetical protein.
  
     0.627
GLIP_1642
Hypothetical protein.
 
     0.559
GLIP_2622
Hypothetical protein.
       0.551
GLIP_3557
Conserved hypothetical protein.
  
  
 0.516
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.