STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_2642Hypothetical protein. (723 aa)    
Predicted Functional Partners:
GLIP_0371
Adenylate cyclase.
  
  
  0.662
cadC
Transcriptional activator of cad operon.
 
     0.641
GLIP_1017
Hypothetical protein.
  
     0.620
GLIP_3532
Hypothetical protein.
  
 
  0.551
GLIP_3481
Glyoxalase family protein.
  
     0.546
GLIP_0017
Hypothetical protein.
  
     0.528
GLIP_0496
Hypothetical protein.
  
     0.508
GLIP_1280
Hypothetical protein.
  
     0.494
GLIP_2857
Intracellular signaling protein; GAF,GGDEF,EAL domains.
  
 
  0.472
GLIP_0591
Hypothetical protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
  0.455
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.