STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_2788Outer membrane protein. (293 aa)    
Predicted Functional Partners:
GLIP_2791
Two-component system, OmpR family, sensor kinase.
 
     0.841
ompR-2
Transcriptional regulatory protein ompR.
 
     0.821
GLIP_2789
Hypothetical protein.
       0.791
GLIP_2787
Hypothetical protein.
 
     0.743
GLIP_3875
TonB-dependent receptor.
  
     0.696
GLIP_0730
Hypothetical protein.
  
     0.656
GLIP_3874
Beta-xylosidase-like protein.
  
     0.654
GLIP_2253
Hypothetical protein.
  
     0.612
GLIP_3435
Hypothetical protein.
  
     0.562
GLIP_3968
Polysaccharide deacetylase.
  
     0.560
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.