STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_3185Glycosyl transferase, group 1. (385 aa)    
Predicted Functional Partners:
GLIP_3186
Hypothetical protein.
     0.939
GLIP_3184
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.846
GLIP_3183
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
  
  
 0.829
GLIP_3188
Hypothetical protein.
  
 
  0.829
GLIP_3182
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.804
GLIP_3187
Hypothetical protein.
       0.773
epsC
Probable polysaccharide biosynthesis protein epsC.
  
  
 0.748
GLIP_2480
Hypothetical protein.
  
 
 
 0.731
GLIP_0917
Alpha-amylase, putative.
   
  0.694
GLIP_1969
Isoamylase protein-like protein.
   
  0.694
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.