STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_3254Chromosome partitioning protein. (260 aa)    
Predicted Functional Partners:
parB
Probable chromosome-partitioning protein parB; Belongs to the ParB family.
 
 0.960
cheW-2
Purine-binding chemotaxis protein CheW.
 
 
 0.950
GLIP_3251
Hypothetical protein.
 
   
 0.804
cheZ
Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
    0.804
cheW
Purine-binding chemotaxis protein CheW.
 
 
   0.798
cheB1
Chemotaxis response regulator protein-glutamate methylesterase 1; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
    0.718
cheA
Two-component system, chemotaxis family, sensor kinase CheA.
 
     0.672
GLIP_3260
Flagellar biosynthesis protein FlhG.
 
  
 0.653
cheY-3
Two-component system, chemotaxis family, response regulator CheY.
 
   0.631
cheV
Two-component system, chemotaxis family, response regulator CheV.
 
 
   0.596
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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