STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_3610Hypothetical protein. (535 aa)    
Predicted Functional Partners:
GLIP_3609
Hypothetical protein.
 
  
  0.840
lacZ
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  0.517
GLIP_0333
Sialate O-acetylesterase.
  
  
  0.516
GLIP_4284
Hypothetical protein.
 
     0.505
GLIP_1170
Predicted sulfatase.
  
 
0.491
bgaM
Beta-galactosidase.
  
  0.452
GLIP_3860
Probable lipase/esterase.
 
 
  0.444
GLIP_3854
Hypothetical protein.
  
     0.443
GLIP_0457
Sulfatase.
  
 
 
0.441
GLIP_3106
alpha-L-fucosidase.
  
     0.422
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.