STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iclRIclR family transcriptional regulator, acetate operon repressor. (230 aa)    
Predicted Functional Partners:
GLIP_4294
Transcriptional regulator KdgR.
  
     0.764
GLIP_3861
Hypothetical protein.
  
     0.757
GLIP_1355
Flavin reductase domain protein FMN-binding.
    
 0.666
kdgK-4
2-dehydro-3-deoxygluconokinase.
 
   
 0.663
GLIP_1981
Hypothetical protein.
  
    0.637
GLIP_1980
Hypothetical protein.
  
    0.627
GLIP_1830
TRAP-type C4-dicarboxylate transport system, large permease component.
 
  
  0.440
mhpF
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
  
  0.415
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.