STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_3927Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (479 aa)    
Predicted Functional Partners:
putA
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.887
GLIP_3913
Hypothetical protein.
   
 
 0.847
tenA
Thiaminase; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
 
     0.806
GLIP_0462
Hypothetical protein.
   
 
 0.696
GLIP_0603
GAF sensor hybrid histidine kinase.
   
 
 0.696
arcB
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
   
 
 0.696
GLIP_2581
Hypothetical protein.
  
     0.657
GLIP_0460
Hypothetical protein.
  
     0.638
thiD
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
 
    0.612
moeB-2
Adenylyltransferase and sulfurtransferase.
       0.601
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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