STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_3952Hypothetical protein. (471 aa)    
Predicted Functional Partners:
GLIP_3951
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.956
mepB
Multidrug/solvent efflux pump membrane transporter mepB.
  0.946
mdtE
Multidrug resistance protein mdtE; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.941
GLIP_3950
Hypothetical protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.904
GLIP_1995
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.769
GLIP_2870
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.756
GLIP_0168
Secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.737
cusB
Cu(I)/Ag(I) efflux system membrane protein CusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.735
cusB-2
Cu(I)/Ag(I) efflux system membrane protein CusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.735
GLIP_1385
Secretion protein.
 
 0.727
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.