STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chbChitobiase. (869 aa)    
Predicted Functional Partners:
GLIP_3985
BadF/BadG/BcrA/BcrD ATPase family protein.
 
  
  0.899
crr
PTS system, glucose-specific IIA component.
 
  
 0.874
GLIP_1818
Secreted serine protease; Belongs to the peptidase S8 family.
 
 
 0.830
GLIP_3983
Tryptophan halogenase.
 
     0.804
GLIP_3982
Tryptophan halogenase.
 
     0.780
nagA
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
 
   
 0.757
GLIP_3988
Glucose/galactose transporter.
 
     0.720
GLIP_1170
Predicted sulfatase.
  
 0.712
GLIP_3981
Hypothetical protein.
       0.672
GLIP_3980
TonB-dependent receptor.
 
     0.658
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.