STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_4016LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
GLIP_1485
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.654
GLIP_4015
Pirin-like protein PM1685; Belongs to the pirin family.
 
     0.636
GLIP_4277
Regulatory protein LysR:LysR substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.631
GLIP_4014
DoxD-like family protein.
       0.577
GLIP_1393
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.556
GLIP_0652
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.522
GLIP_0842
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.513
cysB
LysR family transcriptional regulator, cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.512
metR
LysR family transcriptional regulator, regulator for metE and metH; Belongs to the LysR transcriptional regulatory family.
  
   
 0.473
GLIP_0644
Regulatory protein LysR:LysR substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.457
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.