STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_4105Hypothetical protein. (440 aa)    
Predicted Functional Partners:
GLIP_4104
Hypothetical protein.
       0.515
GLIP_3736
Hypothetical protein.
  
     0.510
GLIP_1989
PA-phosphatase related phosphoesterase.
  
     0.509
GLIP_4106
Transport-associated protein.
 
     0.499
GLIP_3226
Hypothetical protein.
  
     0.494
topA
DNA topoisomerase I.
 
     0.481
GLIP_3094
Hypothetical protein.
 
     0.411
GLIP_4243
Hypothetical protein.
  
     0.407
yhbO
Protein yhbO.
  
     0.400
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.