STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIP_4212Hypothetical protein. (202 aa)    
Predicted Functional Partners:
GLIP_4208
Hypothetical protein.
 
     0.808
GLIP_4209
Hypothetical protein.
       0.775
cusB-2
Cu(I)/Ag(I) efflux system membrane protein CusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.774
cusA
Cu(I)/Ag(I) efflux system membrane protein CusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.773
GLIP_4213
pcoC protein.
  
    0.661
GLIP_3520
Hypothetical protein.
  
     0.590
GLIP_3808
Hypothetical protein.
  
     0.587
GLIP_3698
Hypothetical protein.
  
     0.539
GLIP_4256
TonB-dependent receptor.
  
     0.504
GLIP_1666
TonB-dependent receptor.
  
     0.495
Your Current Organism:
Aliiglaciecola lipolytica
NCBI taxonomy Id: 1127673
Other names: A. lipolytica E3, Aliiglaciecola lipolytica E3, Glaciecola lipolytica E3, marine bacterium E3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.