STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY09218.1Tat pathway signal sequence domain protein; KEGG: pae:PA3713 6.0e-115 spdH; spermidine dehydrogenase, SpdH; K00316 spermidine dehydrogenase. (610 aa)    
Predicted Functional Partners:
EKY07596.1
KEGG: nmn:NMCC_0826 3.6e-101 spermidine synthase; K00797 spermidine synthase; Psort location: Cytoplasmic, score: 9.26.
  
 
  0.882
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
 
 0.881
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.858
speE
Spermine/spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
    
  0.842
EKY09712.1
comF family protein; KEGG: ddd:Dda3937_00349 4.1e-29 gntX, yhgH; gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system; Psort location: Cytoplasmic, score: 9.26.
  
    0.626
hemF
Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
  
 
 0.585
bioA
Adenosylmethionine-8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.
    
  0.556
EKY09219.1
Hypothetical protein.
       0.547
EKY07209.1
Hypothetical protein.
  
     0.476
argD
Succinylornithine transaminase; KEGG: nmc:NMC1306 1.1e-152 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00821; Psort location: Cytoplasmic, score: 9.26; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
     
 0.473
Your Current Organism:
Neisseria sp. F0370
NCBI taxonomy Id: 1127694
Other names: N. sp. oral taxon 020 str. F0370, Neisseria sp. oral taxon 020 str. F0370
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